ULTIMATE X-MEN (post #12) -- Scott's showing an interest in a new woman, and she's not a mutant.  But she might hold the keys to his family, and his past, c 45,000 words
 

The GOLDEN GOOSE series

ULTIMATE X-MEN (post #8) -- Look who's helping Weapon-X!  And say what is Scott expected to do?!  Multiple stories, many authors  (link goes to a subpage) 
WINNER 2002 CBFFA: Best Alternate-X

UNCANNY X-MEN (#394)  Scott and the woman who still loves him, vignette, c. 400 words   (i.e., post Apocalypse, post that awful "I love you, wife" line)
 

In a Hotel Six on Highway Five,
After the Forty-Nines

Dani Moonstar.  An encounter.   A new direction.  Adult  (Core comics after Dani departs the X-Men, but no definite time frame), c. 3400 words
WINNER 2003 CBFFA: Best Adult